Analisis Filogenetik Tetrastigma spp. in Silico

Authors

  • Elpina Sari Program Studi Biologi, Fakultas Sains dan Teknologi, Universitas Islam As Syafi’iyah, Kota Bekasi, Jawa Barat, Indonesia 17411
  • Miftahul Jannah Program Studi Biologi, Fakultas Sains dan Teknologi, Universitas Islam As Syafi’iyah, Kota Bekasi, Jawa Barat, Indonesia 17411
  • Muhammad Rifqi Hariri Pusat Riset Biosistematika dan Evolusi - Badan Riset dan Inovasi Nasional, Cibinong, Bogor, Jawa Barat, Indonesia 16911

Keywords:

cpDNA, DNA barcoding, nrDNA, Tetrastigma, Vitaceae

Abstract

Tetrastigma is a liana from the Vitaceae family distinguished by the presence of tendrils that grow opposite the leaves. Rafflesia, a holoparasitic plant, can only be found in Tetrastigma. This study aims to investigate and analyze the phylogenetic relationship of Tetrastigma spp. using the atp B-rbcL, rbcL, and ITS sequences. The results revealed that the three trees were divided into two main clades: an ingroup clade of 12 Tetrastigma species and an outgroup clade with a high bootstrap value. Compared to the atpB-rbcL sequences, the rbcL and ITS trees produce trees with a wide range of bootstrap values among species. It is recommended that rbcL, ITS, or a combination of these sequences be used in species identification.

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Published

2023-09-09

How to Cite

Analisis Filogenetik Tetrastigma spp. in Silico. (2023). Indonesian Genetic & Biodiversity Journal, 1(1), 1-6. https://igb-journal.com/index.php/igbj/article/view/7